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Morpholino Publication Database

This database contains citations and abstracts for research using Morpholino oligos, as well as some review articles incorporating Morpholino data. You can search the content using the filter boxes below.

There are 12245 scientific papers returned from the database with the search filters currently being used below.

Genome-wide transcriptomics analysis of genes regulated by GATA4, 5 and 6 during cardiomyogenesis in Xenopus laevis

Authors:
Afouda BA, Lynch AT, de Paiva Alves E, Hoppler S
Citation:
Data Brief. 2018 Jan 17;17:559-563. doi:10.1016/j.dib.2018.01.005. eCollection 2018 Apr
Epub:
Not Epub
Abstract:
The transcription factors GATA4, GATA5 and GATA6 play important roles in heart muscle differentiation. The data presented in...
Link:
https://www.sciencedirect.com/science/article/pii/S2352340918300088
Delivery Method:
microinjection
Organism or Cell Type:
Xenopus laevis
Citation Extract:
Afouda BA, Lynch AT, de Paiva Alves E, Hoppler S. Genome-wide transcriptomics analysis of genes regulated by GATA4, 5 and 6 during cardiomyogenesis in Xenopus laevis. Data Brief. 2018 Jan 17;17:559-563. doi:10.1016/j.dib.2018.01.005. eCollection 2018 Apr.

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions

Authors:
Johnson K, Freedman S, Braun R, LaBonne C
Citation:
BMC Genomics. 2022;23:723. doi:10.1186/s12864-022-08953-3
Epub:
Not Epub
Abstract:
Background: During embryogenesis, the developmental potential of initially pluripotent cells becomes progressively restricted...
Link:
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-022-08953-3
Delivery Method:
microinjection
Organism or Cell Type:
Xenopus laevis
Citation Extract:
Johnson K, Freedman S, Braun R, LaBonne C. Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions. BMC Genomics. 2022;23:723. doi:10.1186/s12864-022-08953-3.

Styxl2 regulates de novo sarcomere assembly by binding to non-muscle myosin IIs and promoting their degradation

Authors:
Chen X, Li Y, Xu J, Cui Y, Wu Q, Yin H, Li Y, Jiang L, Wang H, Wen Z, Yao Z, Wu Z
Citation:
bioRxiv. 2022;[preprint] doi:10.1101/2022.10.22.513336
Epub:
Not Epub
Abstract:
Styxl2, a poorly characterized pseudophosphatase, was identified as a transcriptional target of the Jak1-Stat1 pathway during...
Link:
https://www.biorxiv.org/content/10.1101/2022.10.22.513336v1
Delivery Method:
microinjection
Organism or Cell Type:
zebrafish
Citation Extract:
Chen X, Li Y, Xu J, Cui Y, Wu Q, Yin H, Li Y, Jiang L, Wang H, Wen Z, Yao Z, Wu Z. Styxl2 regulates de novo sarcomere assembly by binding to non-muscle myosin IIs and promoting their degradation. bioRxiv. 2022;[preprint] doi:10.1101/2022.10.22.513336.

The Shape of the Jaw-Zebrafish Col11a1a Regulates Meckel's Cartilage Morphogenesis and Mineralization

Authors:
Reeck JC, Oxford JT
Citation:
J Dev Biol. 2022 Sep 22;10(4):40. doi: 10.3390/jdb10040040
Epub:
Not Epub
Abstract:
The expression of the col11a1a gene is essential for normal skeletal development, affecting both cartilage and bone. Loss of...
Link:
https://www.mdpi.com/2221-3759/10/4/40
Delivery Method:
microinjection
Organism or Cell Type:
zebrafish
Citation Extract:
Reeck JC, Oxford JT. The Shape of the Jaw-Zebrafish Col11a1a Regulates Meckel's Cartilage Morphogenesis and Mineralization. J Dev Biol. 2022 Sep 22;10(4):40. doi: 10.3390/jdb10040040.

Biallelic mutations of TTC12 and TTC21B were identified in Chinese patients with multisystem ciliopathy syndromes

Authors:
Chen W, Wang F, Zeng W, Zhang X, Shen L, Zhang Y, Zhou X
Citation:
Hum Genomics. 2022 Oct 22;16(1):48. doi: 10.1186/s40246-022-00421-z
Epub:
Not Epub
Abstract:
Background: Abnormalities in cilia ultrastructure and function lead to a range of human phenotypes termed ciliopathies. Many...
Link:
https://humgenomics.biomedcentral.com/articles/10.1186/s40246-022-00421-z
Delivery Method:
microinjection
Organism or Cell Type:
zebrafish
Citation Extract:
Chen W, Wang F, Zeng W, Zhang X, Shen L, Zhang Y, Zhou X. Biallelic mutations of TTC12 and TTC21B were identified in Chinese patients with multisystem ciliopathy syndromes. Hum Genomics. 2022 Oct 22;16(1):48. doi: 10.1186/s40246-022-00421-z.

Two distinct compartments of a ctenophore comb plate provide structural and functional integrity for the motility of giant multicilia

Authors:
Jokura K, Sato Y, Shiba K, Inaba K
Citation:
Curr Biol. 2022 Oct 19:S0960-9822(22)01603-7. doi:10.1016/j.cub.2022.09.061. Online ahead of print
Epub:
Yes
Abstract:
Comb plates are large ciliary structures uniquely seen in comb jellies (ctenophores).1-3 A comb plate is constructed from tens...
Link:
https://www.cell.com/current-biology/fulltext/S0960-9822(22)01603-7
Citation Extract:
Jokura K, Sato Y, Shiba K, Inaba K. Two distinct compartments of a ctenophore comb plate provide structural and functional integrity for the motility of giant multicilia. Curr Biol. 2022 Oct 19:S0960-9822(22)01603-7. doi:10.1016/j.cub.2022.09.061. Online ahead of print.

Alternative cleavage and polyadenylation generates downstream uncapped RNA isoforms with translation potential

Authors:
Malka Y, Alkan F, Ju S, Körner P-R, Pataskar A, Shulman E, Loayza-Puch F, Champagne J, Wenzel C, Faller WJ, Elkon R, Lee C, Agami R
Citation:
Molec Cell. 2022;82(20):3840-3855.e8. doi:10.1016/j.molcel.2022.09.036
Epub:
Not Epub
Abstract:
The use of alternative promoters, splicing, and cleavage and polyadenylation (APA) generates mRNA isoforms that expand the...
Link:
https://www.sciencedirect.com/science/article/pii/S1097276522009571
Delivery Method:
transfection
Organism or Cell Type:
cell culture: HeLa
Citation Extract:
Malka Y, Alkan F, Ju S, Körner P-R, Pataskar A, Shulman E, Loayza-Puch F, Champagne J, Wenzel C, Faller WJ, Elkon R, Lee C, Agami R. Alternative cleavage and polyadenylation generates downstream uncapped RNA isoforms with translation potential. Molec Cell. 2022;82(20):3840-3855.e8. doi:10.1016/j.molcel.2022.09.036.

Patterning of phase-separated condensates by Dnd1 controls cell fate

Authors:
Westerich KJ, Tarbashevich K, Gupta A, Zhu M, Hull K, Daniel Romo, Gross-Thebing T, Raz E
Citation:
bioRxiv. 2022;[preprint] doi:10.1101/2022.10.20.512863
Epub:
Not Epub
Abstract:
Germ granules, condensates of phase-separated RNA and protein, are essential for germline development, but how these molecules...
Link:
https://www.biorxiv.org/content/10.1101/2022.10.20.512863v1
Delivery Method:
microinjection
Organism or Cell Type:
zebrafish
Citation Extract:
Westerich KJ, Tarbashevich K, Gupta A, Zhu M, Hull K, Daniel Romo, Gross-Thebing T, Raz E. Patterning of phase-separated condensates by Dnd1 controls cell fate. bioRxiv. 2022;[preprint] doi:10.1101/2022.10.20.512863 .

Alternative splicing of apoptosis genes promotes human T cell survival

Authors:
Blake D, Radens CM, Ferretti MB, Gazzara MR, Lynch KW
Citation:
eLife. 2022;11:e80953. doi:10.7554/eLife.80953
Epub:
Not Epub
Abstract:
Alternative splicing occurs in the vast majority of human genes, giving rise to distinct mRNA and protein isoforms. We, and...
Link:
https://elifesciences.org/articles/80953
Delivery Method:
electroporation
Organism or Cell Type:
cell culture: Jurkat
Citation Extract:
Blake D, Radens CM, Ferretti MB, Gazzara MR, Lynch KW. Alternative splicing of apoptosis genes promotes human T cell survival. eLife. 2022;11:e80953. doi:10.7554/eLife.80953.

Lmo7 recruits myosin II heavy chain to regulate actomyosin contractility and apical domain size in Xenopus ectoderm

Authors:
Matsuda M, Chu CW, Sokol SY
Citation:
Development. 2022 May 15;149(10):dev200236. doi: 10.1242/dev.200236. Epub 2022 May 16
Epub:
Not Epub
Abstract:
Apical constriction, or a reduction in size of the apical domain, underlies many morphogenetic events during development....
Link:
https://journals.biologists.com/dev/article-abstract/149/10/dev200236/275389/Lmo7-recruits-myosin-II-heavy-chain-to-regulate
Delivery Method:
microinjection
Organism or Cell Type:
Xenopus laevis
Citation Extract:
Matsuda M, Chu CW, Sokol SY. Lmo7 recruits myosin II heavy chain to regulate actomyosin contractility and apical domain size in Xenopus ectoderm. Development. 2022 May 15;149(10):dev200236. doi: 10.1242/dev.200236. Epub 2022 May 16.

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